ElPoly

Mechanical properties calculation for a system of particles bounded in chains.
Perform a calculation of the characteristic properties of lipid chains in bilayer membrane (diffusivity, pressure profile, radial density plot...).
Required:OpenGl, optional CGAL.

Command list:

All the commands that can be typed in the command line can be written in the argument list with a single dash "-" for single characters or with double dash "--" for words.

• "dens" ElPoly::DensProf
• "3to2" ElPoly::From3To2d
• "3to1" ElPoly::From3To1d
• "2to1" ElPoly::From2To1d
• "pro" ElPoly::ProjectionF
• "core" ElPoly::CoreF
• "coreNano" ElPoly::CoreF
• "RadShell" ElPoly::RadialShell
• "angle" ElPoly::Angle
• "SlabProf" ElPoly::SlabProf
• "SlabAngleProfs" ElPoly::SlabAngleProfs
• "CartDens" ElPoly::CartDens
• "radNano" ElPoly::RadDistrF
• "radCm" ElPoly::RadDistrF
• "radCmN" ElPoly::RadDistrF
• "radStalk" ElPoly::RadDistrF
• "radPore" ElPoly::RadDistrF
• "cartNano" ElPoly::RadDistrF
• "cm" ElPoly::CenterOfMass
• "Dens2Thick" ElPoly::RadDens2Thick
• "Dens2Thick2d" ElPoly::RadDens2Thick2d
• "ThickFromDens" ElPoly::ThickFromDens
• "temp" ElPoly::Temperature
• "nano" ElPoly::NanoParticle
• "surf" ElPoly::Surface
• "diff" ElPoly::Diffusivity
• "DiffSlab" ElPoly::DiffSlab
• "PairCorr" ElPoly::PairCorr
• "pairMon" ElPoly::PairCorrelationF
• "pairChain" ElPoly::PairCorrelationF
• "pairRound" ElPoly::PairCorrelationF
• "pairSquare" ElPoly::PairCorrelationF
• "pairPep" ElPoly::PairCorrelationF
• "AvSnap" ElPoly::AvSnap
• "scatt" ElPoly::ScatteringF
• "scatt2" ElPoly::ScatteringF
• "worm" ElPoly::WormF
• "header" ElPoly::HeaderAverage
• "spe" ElPoly::SpectrumF
• "RadNormPos" ElPoly::RadNormPos
• "AreaDistr" ElPoly::AreaDistrF
• "mid" ElPoly::Midplane
• "midSpe" ElPoly::SpectrumMidplane
• "prop" ElPoly::PropertiesF
• "divOpp" ElPoly::DivideLayers
• "divTube" ElPoly::DivideLayers
• "divVes" ElPoly::DivideLayers
• "AreaCompr" ElPoly::AreaCompr
• "PTrace" ElPoly::PressTrace
• "PRadial" ElPoly::PressRadial
• "Tens" ElPoly::SurfTens
• "TensCartRad" ElPoly::Tens2dCartRad
• "SumTens" ElPoly::SumTens
• "stalk" ElPoly::StalkF
• "StalkLine" ElPoly::StalkLineProfF
• "BackBone" ElPoly::BackBone
• "rem" ElPoly::RemoveChains
• "ChPos"
• "tra" ElPoly::Transform
• "ConvLattice" ElPoly::ConvLattice
• "write" ElPoly::Write
• "WidomOut" ElPoly::WidomOut
• "WidomIn" ElPoly::WidomIn
• "End2End" ElPoly::End2EndDistr
• "ElCoup" ElPoly::ElasticCoupling
• "ElCoupNVT" ElPoly::ElasticCouplingNVT
• "E2EDec" ElPoly::Decoupling
• "SmoothGrid" ElPoly::SmoothGrid
• "IsoSurf" ElPoly::IsoSurf
• "IsoLine" ElPoly::IsoLine
• "IsoLineDens" ElPoly::IsoLine
• "FPore" ElPoly::FetchPore
• "FStalk" ElPoly::FetchStalk
• "AStalk" ElPoly::StalkArea
• "Shift2Center" ElPoly::Shift2Center
• "AvSnap" ElPoly::AvSnap
• "DirDec" ElPoly::Decoupling
• "BilDist" ElPoly::BilayerDistance
• "Bond" ElPoly::BondDistr
• "Diff2Dens" ElPoly::Diff2Files
• "Diff2Pre" ElPoly::Diff2Files
• "RestPre" ElPoly::RestPress
• "tecplotDens" ElPoly::Conv2Tecplot
• "tecplotPre" ElPoly::Conv2Tecplot
• "tecplotHei" ElPoly::Conv2Tecplot
• "rzd" ElPoly::Conv2rzd
• "xyzd" ElPoly::Conv2xyzd
• "vmd" ElPoly::Conv2Vmd
• "povray" ElPoly::Conv2Povray
• "coord"
• "norm"
• "type"
• "file" ElPoly::ChangeFile
• "val"
• "Nei" ElPoly::FindNeighbours
• "sample"
• "open" ElPoly::OpenFile
• ">" ElPoly::OpenFile
• "<" ElPoly::OpenFile
• "f" ElPoly::OpenFile
• "info" ElPoly::SysInfo ElPoly::SysDef

• "q"

• Allink (Up)